It probably depends on what purpose the Anemometer will serve.
If you are looking for accurate logging, then it would be best on its own tower, away from any external disturbance.
If you are just looking to log windspeed for a general indication, or for an over windspeed protection of your turbine, I would mount it about 20% of the prop diameter away.
Also, it would be much easier to mount it on the tower below the wind - this is what I normally see on some very large installations.