i am not familiar with this particular charger, but have
worked on many other xantrex charger/inverters.
They all seem to have a common problem, parasitic oscillations on the DC side
fooling their meter and control circuits so one gets bad voltage readings
and charge shift
points that are off by a couple of tenths of a volt.
Large large (4/0) and short cables to the batteries reduce the series resistance and inductance and allow the batteries to help damp the problem. A large capacitor (on the battery bank side) also helps but it has to be very large. Neither of these
are attractive solutions I understand, but until Xantrex provides remote sensing
and puts some filters (hdw or sw) on the inputs, its all I have been able to do.
If you have a scope, put it on the battery side, set it to AC, and check it.
I was surprised to see .6V P-P of high frequency ripple across the charger outputs.
(worst case on a Xantrex/Heart charger I have seen 90V of narrow pulses, enough
to shock the owner).
In general, I have had very poor luck with Xantrex in off grid applications.
The motor home crowd loves them.
good luck
gello