Jasoncpg, I am pretty new too, so I want to be helpful.
Yes, the magnets should be mounted on the spinning rotor NSNSNS, but there are many problems with your stator.
Each magnet should be smaller than the hole in the center of the coil, but if your magnets are smaller, and they are spaced out evenly, then they will not be over the proper coil legs at the proper time.
Since all the coil legs are evenly spaced out...If you doubled the number of magnets, you "might" be able to get a small amount of one-phase AC, but I hear one-phase has a lot of vibration.
If your VAWT is spinning, you probably know its RPM's are not very fast. It looks like you have used very fine wire in the coils.
I don't want to discourage you. but if you look at working PMA's they are almost all 3-phase. To get 3-ph you need 4 magnets for every 3 coils (per rotor) 3-coils/4-magnets, 6C/8M, 9C/12M, 12C/16M. The rotor needs to be steel, and thick enough that a steel paperclip does not hold onto the back (when a magnet is on the front)
Adding a second steel rotor with the same number of magnets (reversed) on the opposite side of the stator really helps output.
The sides of the coils can touch each other. Look for pics of existing PMA's and compare the layouts.