Wachara,
When you tripped and it broke a bone in your hand, I assume this was due 'only' to the weight of the rotor, not the magnets? If so, here you are, being very careful to keep the rotor away from anything made of steel, walking through the shop but ignoring that piece of carpet that crept up and made you trip (just using my imagination here). Where would we be without mr. Murphy...
As far as safely taking magnets off: I don't think it can be done. I try to handle the magnets only once: when they are to be glued on the rotor plate. Am doing my best to not make mistakes here (triple checking polarity etc.) A bit of extra time spent on this part can literally mean hours saved by not having to remove magnets again.
When the rotor plates are finished, they are stored safely until needed for final mounting. I try to do my trial-fittings of the plates without the magnets present. These things are just too dangerous to mess with.
Oh yeah, for a rotor conversion I'm building, I will have to build a 'fake' magnet out of steel, for trial fittings. Because once I would trial-fit a round magnet in its recessed hole, I have no way of getting it out again (without resorting to temporarily glueing a steel rod to it to extract it again). So, a fake magnet of identical size will be used for trial fittings. (these magnets are just 15x8mm round, BTW...)
Peter
(who's wondering how long it'll take for OSHA to step in and start making laws to protect us from these evil, dangerous magnets. No wait, not OSHA, make that BATF)